![]() Singularity exec docker://unlhcc/mitsuba mitsuba Singularity exec docker://unlhcc/ros-kinetic Singularity exec docker://unlhcc/enet-caffe-gpu Matcaffe is included load matlab/r2016b module and add -B $MATLAB_ROOT:/opt/matlab to the singularity options to use. Singularity exec docker://unlhcc/caffe-gpu caffe Singularity exec docker://unlhcc/nipype-p圓6 Singularity exec docker://unlhcc/nipype-py27 Singularity exec docker://unlhcc/ndmg ndmg_bids Singularity exec docker://unlhcc/fmriprep fmriprep Replace recon-all with other FreeSurfer commands to run. Substitute with the full path to your particular FS license file. Singularity run -B :/opt/freesurfer/license.txt docker://unlhcc/neurodocker-freesurfer recon-all Singularity exec docker://unlhcc/neurodocker-afni Replace python /path/to/my_gnuradio_code.py with other GNU Radio commands to run Singularity exec docker://unlhcc/gnuradio python /path/to/my_gnuradio_code.py Singularity exec docker://unlhcc/neurodocker-ants Singularity exec docker://unlhcc/sonnet-gpu python /path/to/my_sonnet_code.py Singularity exec docker://unlhcc/octave octave Singularity exec docker://unlhcc/keras-tensorflow-gpu python /path/to/my_keras_code.py Singularity exec docker://unlhcc/tensorflow-gpu python /path/to/my_tf_code.py Singularity exec docker://unlhcc/cuda-ubuntu Replace with the desired options for Macaulay2. Singularity exec docker://unlhcc/macaulay2 M2 Singularity exec docker://unlhcc/spades spades.py Singularity exec docker://unlhcc/dream3d PipelineRunner The following table lists the currently available images and the command Publically available Docker images can be found at Docker Hub. ForĬonvenience, HCC also provides a set of images on Docker Hub Singularity can run images from a variety of sources, includingīoth a flat image file or a Docker image from Docker Hub. No user contextual changes or root escalation allowed.Software such as Docker, but is designed with several importantĭifferences that make it more suited for HPC environments. Conceptually, it is similar to other container For example, the application may require Ubuntu but theĬluster OS is CentOS. It allows a user on an HPC resource to run anĪpplication using a different operating system than the one provided by Is a containerization solution designed for high-performance computingĬluster environments. Using Singularity and Docker Containers What is Singularity ![]()
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